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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-02 22:03:30, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Cervus elaphus genome assembly, chromosome: X.
OU343077.1:24795662-24795679
TGGCCCCACACCTCCGGGCCTTTTCTGAGG24795662ACCTGGACATTGGATTGAAAAAAAAAAAAGTTTTAAAGGGTCCTGAGT
Cervus elaphus genome assembly, chromosome: 33.
OU343110.1:2073203-2073220
TGGCCCCACACCTCCAGGCCTTTTCTGAGG2073203ACCTGGACATTGGATTGAAAAAAAAAAGACGTTTTAAAGGGTCCTGGG
Sus scrofa genome assembly, chromosome: 3.
OY997210.1:20186878-20186895
TTGCTTTTGAGACAGTCCCCTCTGGCAGCA20186878ACCTGGACATTGGATTGAAGGAAGGGGAGGGAGGGGAGGTGGGTAGAC
Rupicapra rupicapra genome assembly, chromosome: 18.
OZ022288.1:45227240-45227257
TGGCCCCACACCTCTGGGCCTTCGCTGAGG45227240ACCTGGACATTGGATTGAAAAAAACAGTTTTAAAGCGTCCTGGGTAAA
BNZB_UP_110_A10_19AUG2004_080 Brassica napus BNZB Brassica napus cDNA 5', mRNA sequence.
EE564574.1:199-216
CAAGTTCTTGTTTTTTTCTTTTGAAAATTC199ACCTGGACATTGGATTGAGGATAGGTGACATTGGCAGGAGGTGAATCT
65JKBNMO_UP_051_H02_17JUL2006_002 65JKBNM0 Brassica napus cDNA 5', mRNA sequence.
EL591029.1:693-710
GGCTGCACAAAGCTAAGATTCTGTACCAAT693ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
0097632 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV196479.1:664-681
GGCTGCACAAAGCTAAGATTCTGTACCAAT664ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
RS2AN71JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW729128.1:687-704
GGCTGCACAAAGCTAAGATTCTGTACCAAT687ACCTGGACATTGGATTGAGCGTAGC
TSA: Raphanus sativus var. sativus RNA, contig: WG3_4821.
FX662657.1:722-739
GGCTGCACAAAGCTAAGATTCTGTACCAAT722ACCTGGACATTGGATTGAGCATATGTCATATTGGGAGGAGGGGAATCA
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_4034.
FX700385.1:805-822
GGCTGCACAAAGCTAAGATTCTGTACCAAT805ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_18318.
FX735841.1:735-752
GGCTGCACAAAGCTAAGATTCTGTACCAAT735ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp152296_c0_seq1.
LA333109.1:882-899
AGTTTGATGGGCAGCAGTGTATAAACCTTC882ACCTGGACATTGGATTGAGTCTGATGGAAGGTCATATTGAGCTGAGTT
BOGUJ03TR BOGU Brassica oleracea genomic clone BOGUJ03, genomic survey sequence.
BH454483.1:133-150
AGCAAACAAAACTGAAGGAGAAAAATGCTA133ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
BOMAB54TF BO_2_3_KB Brassica oleracea genomic clone BOMAB54, genomic survey sequence.
BH657179.1:258-275
AGCAAACAAAACTGAAGGAGAAAAATGCTA258ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
BOHXG21TR BO_2_3_KB Brassica oleracea genomic clone BOHXG21, genomic survey sequence.
BH710377.1:79-96
AGCAAACAAAACTGAAGGAGAAAAATGCTA79ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
oeg72g08.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ019516.1:517-534
CAAGTTCTTGTTTTTTATTTAAAAAAATTC517ACCTGGACATTGGATTGAGGATAGGTGACATTGGGAGGAGGTGAATCT
Bos taurus clone CH240-475K15, WORKING DRAFT SEQUENCE, 10 unordered pieces.
AC224795.1:106508-106525
TGGCCCCACACCTCCCGGCCTTTTCTGAAG106508ACCTGGACATTGGATTGAAAAAAAAAGTTTTAAAGTGTCCTGGGTAAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH039L17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC241126.1:2858-2875
ATCTTTAACAAGACAGTGTTGTTGATGCTA2858ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrE041C10, complete sequence.
AC241087.1:32605-32622
ATCTTTAACAAGACAGTGTTGTTGATGCTA32605ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:7169161-7169178
AGCAAACAAAACTGAAGGAGAAAAATGCTA7169161ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:38291611-38291628
CAACTTCTTGTTTTTAATTTAAAAAAATTC38291611ACCTGGACATTGGATTGAGGATAGGTGACATTGGGAGGAGGTGAATCT
Eutrema japonicum cultivar Magic isolate CNU_PCGL_DJ_WASABI_2024 chromosome B04.
CP163471.1:13455837-13455854
GAAATCTTAACAAGTAGTGTTTTAAGGCTC13455837ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCT
Brassica napus genome assembly, chromosome: C07.
HG994371.1:32417339-32417356
CAACTTCTTGTTTTTAATTTAAAAAAATTC32417339ACCTGGACATTGGATTGAGGATAGGTGACATTGGGAGGAGGTGAATCT
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:35237557-35237574
CAACTTCTTGTTTTTAATTTAAAAAAATTC35237557ACCTGGACATTGGATTGAGGATAGGTGACATTGGGAGGAGGTGAATCT
Triticum aestivum genome assembly, chromosome: 6A.
LR862544.1:4021327-4021344
GAAGAGCAAAGATCAGACGGAAATCAACTC4021327ACCTGGACATTGGATTGAATTGCAGAGCTGGCATCATAGGCAGCCTTG
Triticum aestivum genome assembly, chromosome: 6A.
LR877324.1:3647590-3647607
GAAGAGCAAAGATCAGACGGAAATCAACTC3647590ACCTGGACATTGGATTGAATTGCAGAGCTGGCATCATAGGCAGCCTTG
Triticum aestivum genome assembly, chromosome: 6A.
OU343174.1:7206628-7206645
GAAGAGCAAAGATCAGACGGAAATCAACTC7206628ACCTGGACATTGGATTGAATTGCAGAGCTGGCATCATAGGCAGCCTTG
Thlaspi arvense genome assembly, chromosome: 7.
OU466863.1:8922224-8922241
AAATCTTAACAAGTAGTGTTTAAGGCTCAC8922224ACCTGGACATTGGATTGAGCATAAGTCATATTTGGAGGAGGGGAATCA
Sambucus nigra genome assembly, chromosome: 15.
OX422221.1:116629443-116629460
CAAAATAGTACACTCATAATACACATTAGT116629443ACCTGGACATTGGATTGAACAAATTGAATTCCAATGTGCGTGTACTTT
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:235253500-235253517
CCCTTCAAGATCAGCCCATTGGCTCGCTCG235253500ACCTGGACATTGGATTGAGGATGTTCTACCGAGGCATAGTTAACTTGA
Viscum album genome assembly, chromosome: 1_6.
OY728124.1:32114281-32114298
AATATTATTACAAAAAAAATGAAATTTATC32114281ACCTGGACATTGGATTGATAGGTTTCAATAAAACTATTGTTCAAAGTA
Raphanus sativus genome assembly, chromosome: 4.
OY743210.1:5658193-5658210
AGCAATACAATTTAGCTGTAGTAAGGCCAA5658193ACCTGGACATTGGATTGAGCGTAGGTCATATTGGGAGGAGGGGAATCA
Cochlearia excelsa genome assembly, chromosome: 2.
OY748328.1:4925004-4925021
ATGAACACTCAATTCTTGTTTTGTAAAGTC4925004ACCTGGACATTGGATTGAGCAAGTGTCACATTCGGAGGAGGCGAATCT
Draba incana genome assembly, chromosome: 9.
OY755210.1:9410862-9410879
TTCTCAACAGTCAATTCCTATTCAAAGATC9410862ACCTGGACATTGGATTGAGGATAATCAACATTTTCTCACAAACATGAA
Arabis hirsuta genome assembly, chromosome: 12.
OZ053309.1:6057148-6057165
AATCATACACTCAATTCCTATTCAAAGATC6057148ACCTGGACATTGGATTGAGGATACGTCACATTGGAAGGAGGTGAATCT
Arabis hirsuta genome assembly, chromosome: 16.
OZ053313.1:5772053-5772070
TTGTGAACACTCAGTTCCTATTCAAAGATC5772053ACCTGGACATTGGATTGAGGATACGTCACATTCGAAGGAGGTGAATCT
Brassica nigra genome assembly, chromosome: 2.
OZ173172.1:49344741-49344758
TTCAAAACAAGAAAGTGTTATAAGGCCTAA49344741ACCTGGACATTGGATTGAGCATAAGTCATATTGGGAGGAGGGGAATCA
Solanum nigrum genome assembly, chromosome: 10.
OZ176021.1:46255438-46255455
ATGTTCTTGATTTCTCGATTTGAAACTTCC46255438ACCTGGACATTGGATTGAGGATGGTAAGGTGTTGACACCTTGTTCTTG
Solanum nigrum genome assembly, chromosome: 10.
OZ176021.1:48406870-48406887
ATGTTCTTGATTTCTCGATTTGAAACTTCC48406870ACCTGGACATTGGATTGAGGATGGTAAGGTGTTTCCACCTTGTGCTTG
4_Tte_b3v08.
OE000128.1:139760-139777
TTAATAATACTCTTTAAATTTAAAACTGAT139760ACCTGGACATTGGATTGAACCTGGAATGCTGGGCCTAGTAGGCCTATG
Diabrotica virgifera virgifera genome assembly, chromosome: 6.
OU830629.1:74971212-74971229
CTCGCTTGGGCTCCCCTACCACAAGTAATC74971212ACCTGGACATTGGATTGAACTCAAACTCTATGAAGTGAGTCGTGAAGA
Odontocerum albicorne genome assembly, chromosome: 17.
OX463855.1:24490189-24490206
CTGATCTAGTGGTAGAATGCACATCTTCCA24490189ACCTGGACATTGGATTGAATTCCAATGATAACCAAAAATAATGGCGTC
Pasiphila rectangulata genome assembly, chromosome: 14.
OY720249.1:6412817-6412834
ATGCGATCGTGGAAAGCCTAGTGATTTGGG6412817ACCTGGACATTGGATTGAGATCCACGATCCTTAGATTCTTCGTCGACG
Thysanoteuthis rhombus genome assembly, chromosome: 32.
OY735229.1:31217828-31217845
TACAGTTAGAACAGTCAACTCCTGCGTGTG31217828ACCTGGACATTGGATTGACAAAATATGGTATTGTAAATAGGAGTGAAG
Helleia helle genome assembly, chromosome: 14.
OY971428.1:2904963-2904980
CCCAATTCGGCTGCAAAGCAGCATGGCACT2904963ACCTGGACATTGGATTGATCATAAAAGTATTCCGTTTTATCATTTTAA
Ceratothoa steindachneri genome assembly, chromosome: 3.
OZ018319.1:106600698-106600715
GTATGCCCACGTCGAGATTTGAAACAGTAC106600698ACCTGGACATTGGATTGAAGCTTTACCAATTCCAGACATTAATGCTGT
Chrysopilus asiliformis genome assembly, chromosome: 2.
OZ035961.1:3360194-3360211
CATAAAATTAAATCTCAAAGATAAATAATA3360194ACCTGGACATTGGATTGATTATACCTTCATCAACACAAATTCAAGTGT
Isopora palifera genome assembly, chromosome: 12.
OZ125734.1:5566834-5566851
AGTGTATAAAAAATCCTTAGTCTATTCCAT5566834ACCTGGACATTGGATTGAACACCAAGGAAAGAAGATCAAGAAGAGGGA
Helleia helle genome assembly, chromosome: 14.
OZ182901.1:2615323-2615340
CCCAATTCGGCTGCAAAGCAGCATGGCACT2615323ACCTGGACATTGGATTGATCATAAAAGTATTCCGTTTTATCATTTTAA
Phyllidia flava genome assembly, chromosome: 12.
OZ184108.1:5719974-5719991
ATATAAAGTTTAATCAAATTATGCATGACT5719974ACCTGGACATTGGATTGAATGAATGGCTAAACACGGGCCATCCTTAAT
Boloria thore genome assembly, chromosome: 7.
OZ201937.1:6126248-6126265
CTAGAATTTCTTCTAACGTAAATACTAAAT6126248ACCTGGACATTGGATTGACATCTGAATTCTTAGCCCGACCTGGGACTC
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:323666496-323666513
TAGAGCTATGTTCCTCTACCGTTGAAATCT323666496ACCTGGACATTGGATTGATCTGACCTAGTTTGAAAATAACAATCTTGC
Cetorhinus maximus genome assembly, chromosome: 3.
OZ077449.1:183741938-183741955
TTAAAGCTCATAGGAAATTGGACATTTAAA183741938ACCTGGACATTGGATTGAAATGACCTCTGTTAATATCAAGGATTTGTA
Cetorhinus maximus genome assembly, chromosome: 5.
OZ077451.1:98487958-98487975
CCTTGGCCCCAACCTCCCTCCCACTAAGCA98487958ACCTGGACATTGGATTGAAGTCAGAACAATGGACGTTTCAGTCAGCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCTGGACATTGGATTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCTGGACATTGGATTGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.613 | 0.605 | search_plus_done; http://172.18.8.135:50800/match?q=ACCTGGACATTGGATTGA&k=0&no_gap=0&offset=0&limit=50
0.755 | 0.142 | search_minus_done; http://172.18.8.135:50800/match?q=TCAATCCAATGTCCAGGT&k=0&no_gap=0&offset=0&limit=0
0.755 | 0.000 | cgi_end;

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